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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 1
Map Start: 0 bp
Map Stop: 43,268,879 bp
Features by Type:
432 Marker Oryza
340 QTL
772 Total

Map Features

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Items 1 to 25 of 772.       of 31 | Next
Rice - Synthetic_map1 - 1
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
64 QTL 40,700,034 - 41,541,798 No other positions
744 QTL 34,940,404 - 40,566,030 No other positions
1515 QTL 39,687,395 - 40,216,906 No other positions
2049 QTL 34,940,404 - 40,566,030 No other positions
1997 QTL 34,940,404 - 41,541,798 No other positions
209 QTL 27,119,782 - 27,119,848 No other positions
1090 QTL 1,039,086 - 3,509,366 No other positions
1839 QTL 30,870,169 - 31,227,501 No other positions
136 QTL 34,940,404 - 39,433,464 No other positions
820 QTL 5,759,481 - 5,763,641 No other positions
1584 QTL 4,058,510 - 4,061,975 No other positions
2123 QTL 39,566,201 - 40,919,568 No other positions
590 QTL 33,956,950 - 37,887,562 No other positions
1383 QTL 37,889,242 - 40,167,060 No other positions
375 QTL 40,063,624 - 41,969,197 No other positions
1212 QTL 40,742,636 No other positions
1939 QTL 34,940,404 - 42,954,294 No other positions
192 QTL 34,940,769 - 40,700,034 No other positions
950 QTL 31,427,184 - 33,053,654 No other positions
1726 QTL 38,286,648 - 39,687,637 No other positions
2183 QTL 11,077,470 - 14,626,881 No other positions
59 QTL 34,940,404 - 40,566,030 No other positions
734 QTL 40,700,034 - 41,541,798 No other positions
1503 QTL 39,687,395 - 39,687,637 No other positions
2047 QTL 34,940,404 - 40,566,030 No other positions